H pylori Probiotics, and Treatment Success

How To Use Probiotics as Allies During H. pylori Treatment

If you’re experiencing the classic H. pylori symptoms of pain, burning in your stomach, or ulcers, or you’ve tried to treat H. pylori but didn’t succeed, you’ll be happy to know that probiotics are a simple, effective helper.

It might not seem like ordinary probiotics could make much of a difference against the pathogenic bacteria Helicobacter pylori. But the surprising news is that various probiotic strains appear to prevent H. pylori infection [1], significantly improve the success of H. pylori treatment [2 Trusted SourcePubMedGo to source], and even sometimes completely treat it (in a minority of cases) [3 Trusted SourcePubMedGo to source].

Let’s explore what research says about H. pylori, the effects of probiotics on H. pylori, and how probiotics best fit into H. pylori treatment.

H Pylori Probiotics: Helicobacter Pylori bacterium micro shot

What Is Helicobacter pylori?

Helicobacter pylori — known as H. pylori for short — is a spiral-tailed pathogenic bacteria that primarily resides in the stomach, though it can also live anywhere in the gastrointestinal tract [4 Trusted SourcePubMedGo to source].

H. pylori was discovered by two Australian researchers, Barry Marshall and Robin Warren, one of whom proved H. pylori caused gastritis by infecting himself with the bacteria [5]. They were awarded the Nobel Prize in 2005 for this important discovery for gastroenterology.

It’s estimated that more than half of the world’s population has H. pylori present in their gut [6, 7 Trusted SourcePubMedGo to source]. Only 10-20% of people infected will develop symptoms like peptic ulcers, and a very small percentage will develop gastric cancer [8].

H. pylori burrows into and inflames the stomach lining, which affects the acid-producing parietal cells of the stomach [9]. A chronic decrease in stomach acid due to H. pylori infection is a risk factor for many conditions and side effects downstream. Low stomach acid can lead to vitamin B12 and iron deficiency, poor protein digestion, low bile and enzyme secretion, and slow gut motility [10 Trusted SourcePubMedGo to source, 11 Trusted SourcePubMedGo to source].

Eradication of H. pylori leads to the resolution of symptoms in people with peptic ulcer disease and prevents recurrence [12 Trusted SourcePubMedGo to source, 13 Trusted SourcePubMedGo to source, 14 Trusted SourcePubMedGo to source].

Symptoms of H. pylori Infection

H. pylori activity causes stomach symptoms, including:

  • Bloating, gas, and abdominal pain
  • Burning stomach
  • Stomach pain on an empty stomach
  • Loss of appetite
  • Nausea
  • Frequent burping
  • Heartburn, reflux, or GERD
  • Peptic ulcers or duodenal ulcers
  • Gastritis (inflammation of the stomach lining)

H. pylori colonizes the gastric epithelial cells. As the bacteria break down proteins in the stomach wall, it produces the enzyme urease. High levels of urease increase ammonia in the stomach, which leads to gastric inflammation and damages the gastric mucosa [15 Trusted SourcePubMedGo to source].

Eradication of Helicobacter pylori usually resolves these symptoms.

Probiotics Are Allies for H. pylori Treatment

Probiotics word highlighted in the dictionary

Probiotic bacteria have been shown in multiple meta-analyses and systematic reviews (the highest quality data) to improve the outcome of H. pylori treatment.

Specifically, probiotic supplementation has been shown to:

The long-term use of probiotics also appears to reduce the risk of developing disorders associated with the gastric inflammation caused by H. pylori infection, such as ulcers, gastritis, and cancer [20].

Not all the data agree. One meta-analysis concluded that probiotics didn’t improve Helicobacter pylori eradication rates, but did find that side effects, such as diarrhea and nausea, were reduced [21 Trusted SourcePubMedGo to source]. A small clinical study came to similar conclusions [22 Trusted SourcePubMedGo to source].

However, a wide range of meta-analyses, systematic reviews, and clinical trials conclude that probiotics make a significant difference in H. pylori treatment. Given these data, the role of probiotics should be prominent during treatment.

Best Probiotics for H. pylori Treatment

Scientists have studied many different types of probiotics for their effect on H. pylori eradication rates. Some studies have tested single strains, but many different strains and combinations have been shown to be effective at improving treatment success. Let’s summarize what we know about the best probiotics for H. pylori treatment.

Lactobacillus and Bifidobacteria Probiotics and H. pylori

Lactobacillus and Bifidobacteriaprobiotics have been shown in multiple meta-analyses and systematic reviews to support successful H. pylori treatment, though this may partly be due to the fact that these are the most commonly studied probiotics.

Notable research about Lactobacillus (lactic acid bacteria) and Bifidobacteria probiotics (such as Lactobacillus acidophilus and Lactobacillus reuteri) for H. pylori found:

  • Lactobacillus casei was identified as the best for H. pylori eradication rates [23 Trusted SourcePubMedGo to source].
  • Probiotic combinations that include Lactobacillus casei, L. plantarum, L. reuteri, L. salivarius, L. sporogenes, L. acidophilus, L. rhamnosus, Bifidobacterium infantis, and B. longum can help with treatment side effectssuch as diarrhea, constipation, nausea, vomiting, and taste disturbance [24 Trusted SourcePubMedGo to source].
  • A broad range of Lactobacillus probiotics increased the success of H. pylori treatment and reduced side effects [25 Trusted SourcePubMedGo to source].
  • A randomized controlled trial led by H. pylori researcher Cruchet showed that Lactobacillus johnsonii Li1 reduced H. pylori infection in children compared to controls [26 Trusted SourcePubMedGo to source].
  • Lactobacillus gasseri strain LG21 has been shown to increase the eradication of H. pylori and to reduce side effects [27].
  • A promising pilot study in mice showed that Lactobacillus gasseri OLL2716 reduced inflammatory cytokines and inhibited growth in antibiotic-resistant H. pylori [28 Trusted SourcePubMedGo to source]. More research will have to be done to confirm the clinical utility of this finding.

Saccharomyces Boulardii Probiotics and H. pylori

Saccharomyces boulardii is a beneficial yeast that has probiotic properties. It has been widely studied and has been shown to also be supportive for eradicating H. pylori.

In a systematic review, Saccharomyces boulardii alone was shown to eliminate H. pylori infection in 12% of cases [29 Trusted SourcePubMedGo to source], though more research is needed to confirm this result.

Saccharomyces boulardii has also been shown in at least two meta-analyses to increase the success of antibiotic triple therapy and reduce side effects [30 Trusted SourcePubMedGo to source, 31 Trusted SourcePubMedGo to source]

Additionally, it was shown in a systematic review to specifically improve bloating during H. pylori treatment [32 Trusted SourcePubMedGo to source].

Soil-Based (Bacillus) Probiotics

There is a lot less research on soil-based probiotics compared to the other two types, but limited research shows that soil-based probiotics can help H. pylori treatment.

A systematic review concluded that a multi-strain probiotic including soil-based bacteria such as Bacillus mesentericus and Streptococcus faecalis improved loss of appetite during treatment [33 Trusted SourcePubMedGo to source].

A review of the evidence for Bacillusprobioticsin H. pylori treatment concluded that they were particularly effective at reducing antibiotic-associated diarrhea [34]. This review suggested that the likely mechanism is due to their ability to inhibit pathogens and modulate the body’s immune response.

With all these data that suggest probiotics support H. pylori treatment, let’s explore how to best use them.

H Pylori Probiotics: Woman lying on the couch with eyes closed and smiling

H. pylori Testing and Treatment

If you have symptoms associated with H. pylori, like peptic or duodenal ulcers, or persistent and chronic heartburn or burning in your stomach, being tested for H. pylori may be a good idea.

There are four ways to test for H. pylori infection.

A stomach biopsy during endoscopy is one option but is quite invasive. Results may vary depending on the sampling method, how widespread the infection is, and how the sample is tested after collection [35]. For this reason, other testing methods may yield better results, and will certainly be less expensive and invasive.

The Urea Breath Test (UBT) looks for the urease-virulence factor in your breath after ingesting a challenge solution. Any LabCorp or Quest laboratory can run a Urea Breath Test (UBT) for H. pylori.

An H. pylori blood test looks for antibodies to H. pylori. A positive result indicates present or past infection. This test is the least reliable for diagnosing H. pylori [36].

Stool testing screens for H. pylori. Some labs Use PCR-DNA tests to screen for H. pylori DNA in your stool sample. The test also looks for how virulent the H. pylori strains you have are, which can provide some clues as to how damaging the infection is.

Speak with your doctor for advice about testing for H. pylori.

Should You Treat a Positive H. pylori Test?

H. pylori has definitely been associated with stomach and duodenal ulcers and gastritis, but there is some debate about whether H. pylori is a commensal (normal) bacteria in the gut or an infectious bacteria that needs to be removed.

Because H. pylori is common among the population, having it doesn’t necessarily require action. Probably the best measure of whether or not you should treat H. pylori infection is whether or not you have clear symptoms of H. pylori, like burning in the stomach, peptic or duodenal ulcers, or chronic heartburn and reflux.

If you are positive for H. pylori but do not have symptoms of the infection, treatment is likely not necessary. If you do have symptoms, then pursuing treatment is likely a good idea.

Treating H. pylori With Probiotics Alone

If you have tested positive for H. pylori but don’t have common H. pylori symptoms, you may simply benefit from using probiotics to balance your microbiota.

A systematic review did find that a small percentage of H. pylori infections can be eradicated with probiotics alone [37 Trusted SourcePubMedGo to source]. So, if you have tested positive for H. pylori and you DO have common H. pylori symptoms, such as gastritis, ulcers, stomach pain, or bloating, you may also choose to try a trial of probiotics alone before treating with more intensive therapy.

If your symptoms or H. pylori test don’t resolve with probiotics alone, then you can consider escalating your treatment to include probiotics plus antimicrobial therapy. Be sure to discuss your treatment plans with your doctor.

Standard H. pylori Treatment

The standard, first-line antibiotic treatment of Helicobacter pylori infection, called “triple therapy”, which is 14 days of:

  • A proton pump inhibitor (PPI) such as omeprazole, for its inhibitory effect on stomach acid, to allow healing of the stomach lining.
  • Two antibiotics together, such as amoxicillin, metronidazole, or clarithromycin

However, H. pylori eradication rates with this regimen are variable, depending on the antibiotic resistance of the H. pylori strains [38 Trusted SourcePubMedGo to source]. New antibiotic therapy strategies have recently been designed, including sequential therapy [39 Trusted SourcePubMedGo to source], where a series of antibiotics are given over the treatment course, and quadruple therapy, where a PPI with multiple antibiotics are given along with bismuth [40 Trusted SourcePubMedGo to source].

Among functional medicine and naturopathic doctors, a standard treatment in clinical practice may include herbal antibiotics and probiotics as an anti-H. pylori approach.

No matter which treatment course your doctor prescribes, a lot of patients experience adverse events and side effects on antibiotics or herbal antimicrobials. This is where probiotics really shine.

Probiotics With Antibiotic H. pylori Treatment

Blending probiotics with the standard Helicobacter pylori eradication therapy increases the rate of treatment success and decreases side effects, such as antibiotic-associated diarrhea, nausea, and bloating [41 Trusted SourcePubMedGo to source].

Including probiotics during your anti-Helicobacter pylori treatment is highly likely to minimize these side effects, and increase your likelihood of success.

Research suggests using a diverse range of probiotics together provides better results than a single strain or variety [42 Trusted SourcePubMedGo to source, 43 Trusted SourcePubMedGo to source], and the research on H. pylori supports this [44 Trusted SourcePubMedGo to source, 45 Trusted SourcePubMedGo to source]. A simple protocol that includes one quality probiotic from each of the three main categories of probiotics simultaneously— Lactobacillus-Bifidobacteria blends, Saccharomyces boulardii, and a soil-based probiotic — is best. (For more on how to use probiotics properly, see our Probiotics Starter Guide.)

The Bottom Line

Though eradication of H. pylori infection can be challenging due to antibiotic resistance and side effects, probiotics are a wonderful ally. Probiotics have been shown to increase eradication of H. pylori, reduce unpleasant side effects such as nausea, diarrhea, and bloating. Give probiotic therapy a trial before moving on to more conventional treatment, and then include probiotics as part of your H. pylori treatment plan to ensure success.

➕ References
  1. Use for reference links. Use Pubmed citation NOT just URL when available

Need help or would like to learn more?
View Dr. Ruscio’s additional resources

Get Help


I care about answering your questions and sharing my knowledge with you. Leave a comment or connect with me on social media asking any health question you may have and I just might incorporate it into our next listener questions podcast episode just for you!